The main reason many leave the glass off is for gas exchange with the air to remove excess carbon dioxide.
Good article from Randy here:
http://www.reefkeeping.com/issues/2004-09/rhf/index.php
The other reason is with bright lighting you will get a lot of heat retention. High water temp!!
Some want the tank to evaporate at a faster rate to allow additional top-off of RO/DI water combined with calcium and alkalinity additives. I’m in a little bit of a different situation here in the desert. I have left a portion of the tank covered with glass to prevent or slow down a lot of evaporation (it’s pretty dry here!) and prevent too much top-off from my Kalk reactor.
HTH
Jay