I had them on a clam that I got in a couple years ago. I acclimated the clam (in the bag) to my water, and then took the thing out and started picking it over w/ a pair of tweezers and a magnifying glass. Wasn't a lot of fun, took me a half hour... Twice! Knock on wood, I still have that clam.... I just got it to close all the way, pulled it out and held it in a towel. Turned it upside down, and went over every inch of the thing. Found most on the underside, near the mantle, and the hole where it's pseudopod comes out. That was the hardest area to clean. There were also a lot of "Bumps" that looked like snails, and I scraped those off. Don't know if they were or not, might have just been imperfections in the shell, but I worked 'em over regardless. After 5 minutes of this treatment, I put the clam back in the bag, and gave it a few minutes, before pulling it out again.
Having so many clams in your tank however, I think puts you in a different boat. Your sandbed is probably loaded w/ them, so even if you are able to clean 1 clam entirely, there's a good chance it will just get re-infected once you put it back in the tank. Do you have a hospital tank, or another system you can place them in after they are cleaned? I would almost suggest setting up a small tank w/ no substrate or rock at all, use the water from your main system so that things are not stressful for the clams, and keep them there until the tank is purged. Best of luck.
- Mac