Thanks SOOooo much!!!! I really needed the explanation of water flow through the chambers, i guess that would have been the quickest way to ask the question... so thank you for reading all the bs in there and unerstanding what i really needed to know.
SOoo, please confirm my understanding and correct me if i'm wrong here...
A) in theory, if the water is flowing from the cube into chamber one and going up and over into chamber 2, does it make sense to build a rack that fits chamber 1 and has a layer of floss, a layer of phosphate stuff, and a layer of carbon? (this should ensure that all water coming out of the biocube is flowing directly through the media. correct?)
B)Another option would be to catch the water as it trickles over into chamber 2 like the bioball method... except putting the rack there... but for this method to work, doesn't the water level in that chamber need to be a little lower so the water actually "FALLS" into the media... and my issue with this method is that my pump works too fast and my water evaporates too quickly to keep the water low enough that it goes through ALL three layers before mixing with the rest of the water (need fool proof method of making sure all water goes through filter media) It could be remedied once i get my auto top off working correctly though.
C) The false floor in chamber two... is this the really flat black piece or the thicker one with inset? Because my thought here is that i could leave my pouches flat and the water would flows into chamber 2 and down through the media, through the false floor and over then over into chamber 3. RIght?
Thank you again for your help. I'm about 5 months into the hobby and through all the reading have really started to like the idea of a macro tank. Originally, i was considering seahorses for that tank, but after reading up on them, i realized that they need slightly different parameters than a reef... to set for one is to starve the other so i decided against it, but I really liked the look of a seahorse tank I saw where it was filled with many different types of macro algaes so this is the direction i'm heading for the "sump/refugium biocube". The frags are temporary until I figure out where to put them in the main tank. I will not want to hide the prettier macros, but had the cheato in as a cleaning tool. I'm hoping to forego a skimmer altogether eventually... right now using the biocube one and it's pulling some brown tea so not ideal, but working none the less. I was noticing a lot of floating junk in my DT so i started rethinking the water flow and realized that there's nowhere in the setup where water is directly flowing through the media... wouldn't matter what i did to the tank, if it's not filtered properly, gonna spend the rest of my life fighting problems in the tank.