I run blue only for the first and last hour or so on the timer, with full spectrum the middle portion. My Chinese fixture was about 10" above water and sps seemed to like it at the to, so did some zoa's and LPS as well, rest were middle or bottom of a 46 bowfront.
Ill be upgrading lights for the new 110 I am setting up right now and Ill be using the sunrise/sunset function on those at the beginning and end.
also you may get a better light spread if you pull the 90* lenses from the leds and let them go at their natural 120* output, especially if closer to the top of the tank, on a 40b they will still have enough light penetration to make corals at the bottom happy.