That's terrible! I can't say that I "know" how to handle such a situation, but I can only imagine keeping your water parameters spot-on during the healing process will help. There may be some kind of water treatment/medication out there to help with healing, but I don't know. Good luck.
They make a marine Melafix that is reef safe it helped out my Lubbock's That Fish Place ( my lfs) carries it are you far away from it ? ( Its in Lancaster, PA)
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