Small bubbles in the silicone are actually pretty common and usually not a sign of weakness. In many cases it can be related to the tensile strength of the silicone being used. Some of the stronger structural silicones are thicker and the gases created during curing have a harder time escaping, which can leave small bubbles behind.
The thickness of the glass and the size of the silicone joint can also play a role. When you have thicker panels or a larger bonding area, it becomes more difficult for those gases to work their way out while the silicone is curing.
Because of that, small bubbles in the seam often show up even in very well-built tanks and don’t necessarily indicate a structural issue.