Changes in lighting are notorious for causing problems. The fact that it took 2 months is a little strange, but not really... Some people say that you should decrease the lighting duration after adding new lights. This will help corals adapt. It might help with your SPS corals, although never did anything useful in my situation **. Also, I would definitely look into a UV shield. If your Mhs are double-ended, I'm told this is necessary. Mine where single ended, but I still think I should have had them.
** Background info - My situation:
I found that some corals would lived fine under a 250MH for months and even grew well, but all of a sudden for no reason, they would start bleaching and dieing. I'd move them lower in the tank and they'd come back. But when I tried to move them up again they would bleach again... Occasionally they'd do okay for a month or so and then bleach again. With some such as zoas, I'd observe the polyps get smaller and smaller until they disappeared, almost like they were starving...
Whats really odd is that I finally gave up and switched to PC lights and the same corals are doing great. Within 3 months or so, they have grown and average of 3x their size. In the 4-5 years I had most of them under the MH's they lived, but never grew.... Granted these are things like zoas palythoa, an LT anemone, etc... but still these corals are soft corals, that are supposed to like fairly high levels of light....
My thinking is that the issue was something to do with the UV light produced by the MHs. I did notice when they started bleaching, their tissue would start to flake off, like a sunburn. Maybe the constant sunburning just stressed them out too much or some light protective nutrient was being used up. The other possibility, is that the zooxanthellae, grew to fast and poisoned the corals with excess byproducts. (This is actually the exact subject that sparked my interest in gene regulation).