If you got them from reefgeek, i bet Greg will work with you on switching it out. I've bought several orders from there, and everything was always handled very well. Just send him an e-mail. In my most recent order, I bought an AquaController 3 with pH probe, etc. I got the shipment and noticed the pH probe was left out. I contacted Greg and he sent me not just the pH probe I ordered, but upgraded me to a lab-grade pH probe. I've also had some T5 bulbs go out prematurely, and he's given me a prorated credit for them.
I've only used DE, so don't really have much experience with SE bulbs, but I think it mostly comes down to what color bulb you want to use. Some bulbs are only available in DE or SE. I also think that DE fixtures/pendants are more compact than SE, because the bulbs are smaller, but I've read that DE bulbs don't disperse the light as well as SE.
Having said all that, like I said, I've only used DE and have been very happy with them.