That's a very interesting idea, thanks! My only concern is what if an isopod got a good meal and dropped off and got away-it'd then probably have the energy to reproduce.
I wonder how long an isopod hangs onto a fish?
Maybe Prazi or another chemical would make isopods release. That's probably easier on the fish than manually picking. It wouldn't be all that much work to set up a 10 gal recovery tank. Then you could have two groups of 3 or 4 fish to alternate.
Freshwater dip the fish and I bet they jump right off.