Are Deep Sand Beds, DSBs, dangerous to use in a marine aquarium?

Not all of us running DSB are doing it Shimek style muck and never touch ;)
Yet in the overall scheme of things, you and Mr. Shimek are probably not that far of in your views of sand beds.

Oh oh, now I'm talking to a figment of my imagination. That's good right? :D
 
If you are looking for anecdotes, I kept a deep sand bed of fine oolitic aragonite for several years.

I didn't think it was doing anything good or bad, so I removed it to replace it with large rock filled refugia (44 gallon Brute cans), lit on the top to grow macroalgae. :)

Ding ding ding! Best post by Randy! But seriously, adding a touch or two of your own personal experience feels good, doesn't it? :)

Not all of us running DSB are doing it Shimek style muck and never touch ;)

Isn't this the core of what Reefin Dude is saying? Are we coming to a consensus here?
 


For rather newish hobbyist like myself (1.5 years) and with probably a more open mind than the established individual, I am sick of hearing conclusions based on scientific studies,


I doubt it .To be open minded implies some level of understanding of what you are open to beyond judging the hard work and effort of others and dismissing it because it doesn't fit a limited pool of knowledge experience or willing effort .

Since I'm not a formally trained scientist ;just an avid hobbyist and avid student of science as it pertains to the hobby I may be less frustrated than the scientists who read your dismissive comments .
Obviously, if your conclusion is that there is consensus given all the misstatements and misinformation and many largely irrelevant off point extrapolations and citations in this thread than your mind may be open but it seems to be sleeping. How could you be sick of them if you haven't read them or understood them.

The details matter to me , the facts matter not just the opinions;further the opinions and insights of some matter more than those of others . In time with effort one can learn to sort the wheat from the chaff. The facts matter more IMO as they enable folks with the ability to understand them and the willingness to exert some effort to draw their own conclusions and to be intelligently selective and open minded as they seek opportunities for continuous improvement and learn ways to interpret their own observations in their aquariums.

It's really sad that someone showing little knowledge of the subject is "sick of it" and of trying to learn and thinks they can rate others efforts from a position of self anointed superiority based on being uniformed and therefore more open minded. There is a saying from the management vernacular I learned long ago that seems apt:

"If you don't know where you are going any road will get you there".

Your posts have added exactly nothing to the information pool in this thread .btw They are just snide and derisive jabs at those who least deserve it delivered from a patronizing perch.

Personally, I don't care what you are sick of or not sick of . If you don't like facts or they are too difficult for you ; don't read them or go to a less advanced discussion. If you want to know what someone does with their own system ,just ask without snide commentary or efforts at patronizing. Some of us don't grandstand about our own approaches to avoid being prescriptive and concentrate on informing folks of what is known and unknown about certain methods and processes enabling them to make their own choices .I am always willing to tell what I do anecdotally but don't hold it out as a model for all to follow. I know others are as well.
 
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Doubtful, I don't know of any proper peer reviewed published marine science research papers that are based on a mere two weeks research. Most have a year or many years into the research, far from quick and off the cuff.

A year, I have amphipods older than that.
(Bill, I just like argueing with you) :dance:
 
Tom/TMZ:

I am sorry that you felt a need to write a post like that. You've made a lot of assumptions based on a few posts that I have written. Some may be right on while others are off the mark. I do have a great understanding of this subject (as a non scientist like you) but I choose not to get involved because there seems to be enough "experts" out there. Another one preaching the same thing is not needed. What is needed is to break down the scientific jardon to everyday speak. That's what's missing. We all hide behind an internet screen name. I don't know you from a bum off the street. Why would I believe you or anyone else? As an outsider looking in, it is obvious you have a lot of knowledge but it is also obvious you carry a prejudice. My simple point (and it is an opinion) is that science can only take us so far. If anecdotes didn't exist you would not be "Reefkeeping Mag Staff" and this forum would not exist.

Can we go back to the subject matter now? Thanks. Here's a smiley face for good measure. :) I think we forget this is a hobby, something we CHOOSE to do, and we love it all the same.
 
I think we forget this is a hobby, something we CHOOSE to do, and we love it all the same.

I never forget it is a hobby which is also the reason I don't take any of this to seriously and could never argue with anyone about it. There are no experts for a hobby because hobby by definition means a past time for enjoyment. If it were not, they would call it work. And I hate that "W" word. :beer:
 
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What is needed is to break down the scientific jardon to everyday speak.

I strive for easy speak. Some,however, chose to be very pedantic and mistate facts in a process of shotgunning in any study ,the more the merrier , and make inept extrapolations form them.. Techno speak and debate natuirally follows that.



it is .... obvious you carry a prejudice.

Poorly judged;can't help yourself?:lol:
It should not be so because I don't other than for facts as facts and opinions as opinions and in opposition to absolutist positions.

Read the thread and posts. There is no prejudice to one method or the other there on my part.;just debate on misleading or inaccurate information presented as fact.:sleep:


Can we go back to the subject matter now?

Sure if you'll allow it , without useless and inaccurate diversions to personality ssessments ;what subject is it that you are actually interested in ?

This is my opinion in relatively easy speak. What's yours?

I've used and use shallow sand, deep sand and bare bottoms. There is no scientific reason of which I am aware to favor one over the other; they all require maintenance.
It is more of an aesthetic choice.
If you like the look of sand use it and clean it periodically,replenish some with new fauna bearing sand from time to time and it should do fine for a very long time . If you want to keep critters that need deep sand like certain wrasses and anemones ,using sand beds of appropriate depth for them is a necessity

Deep sand beds lost some of their allure a a biofilter , when I realized the bacteria performing denitrification are facultative heterotrophs. They live in the presence of oxygen and when they exhaust it in a given location they turn to nitrate for it facilitating the formation of N2 gas from some of the freed up N which exits the tank. If there is left over organic material and both oxygen and oxygen sourced from nitrate are exhausted,sulfate reducing bacteria take over.
This means denitrifying bacteria can do quite well in shallow sand or even on bare surfaces . They even create hypoxic conditions in their mulm where anaerobic activity occurs;ie, using the NO3 for oxygen. So, denitrification via assimilation of dissolved nitrogen as these bacteria grow and nitrate reduction to N and N2 occurs in the top half inch or so of the bed. Not much happens down deep for denitrification since these heterotrophic bacteria need a source of oxygen organic carbon, nitrogen and phosphate to grow and not much moves down there via diffusion, a relatively weak force or even advection a bit stronger but still inadequate force. Not much organic carbon,oxygen, nitrogen or phosphate will get down there fast enough to encourage much deitrification; nor much worry about sulfate reducing bacteria taking over and producing H2S since the sufat reducers need the organics too. In fact ,ime, you can find just as much evidence(black sufides) of anoxia and sufate reduction activity in shallow beds of an inch or so asanywhere else.

Overall, a shallow bed reduces nitrate a about the same rate as a deep one since the action is near the top where the nutrients are. Thus , the choice about a sand bed is more a preference than a case of a good method vs. a bad one,imo
 
algae is not able to uptake organic P, organic P must first be converted to SRP by bacteria.
Explain what you mean by SRP.
Algae can access organic phosphate.
It can also convert inorganic phosphate to it.

SRP soluble reactive phosphorous. inorganic p. what good is algae to us then if it is able to uptake organic P? nobody is denying that algae is able to convert SRP to organic. once it is converted to organic again, then what happens to the P? if it keeps going around and more food is going into the system, then there must be an increase in total P.

algae and bacteria are going to grow where the resources are. they are not able to call a place home, then go out foraging for resources. the resource need to be where they are.

Huh? The algae live in water column and take nutrients from it along with any they get from substrate. They are invasive and spread out .Bacteria show up all over .What are you talking about?

we were not talking about the water borne algae and bacteria, we were talking about the algae/cyano growing on the substrate.

Why do you think they are competing? They occupy completely different niches; the benthic organisms serve as an important cog to recycle nutrients so that higher life can use it. This isn't a competition, it's a food web with multiple complementary parts. The main thing that competes with corals, e.g., are other corals, not benthic organisms.

because they are. space and oxygen are not niche resources. they are in the same box, they have to be competing for resources. again, recycling is not exporting. what organism in our systems eat the worms in the substrate that is in the water column? how does the nutrients contained in benthic organism get out of the substrate, whether it is dead or alive? simple question.

The input rate is also way higher in nature, and the net sedimentation rate is vastly higher than in our systems, by virtue of terrigenic input; compared to a coral reef in nature, our organic matter input/sedimentation rate/etc is at least a couple orders of magnitude lower, which is then reflected e.g. in sediment build up rates. Theoretically, if you wanted to replicate natural input rates, then I suppose yes, the sediment would fill up faster. But you'd probably run out of money buying all that food, first.

1) In nature, removal via advection (ie. the sediments being washed away) is a tiny component of the net picture in terms of nutrient removal. The vast, vast, vast majority is recycled in the system, and what does get washed away is replaced by new input. And the benthos itself is not washed away (unless you want to start considering life history and larval migration etc). The types of disturbance that actually do impact the levels of benthic organisms are relatively rare (pretty much just a tropical storm). Much more important is the semi-regular small disturbances such as benthic grazing, larger animals burrowing, etc.

no, the wash away rate is much higher in nature. we ignore the importance of substrate movement in our systems. it is washed out to sea. put a stick in the sand at any beach and see how much of the sand moves in an hour. it is far more than some silly 4 inches that is said to be the optimal depth for a DSB. nature is moving literally tons more sand around than we are. all of this disturbances on a "tiny" tidal scale fail to compare with the massive amounts of movement done when tropical storms come through. how can we ignore this in our systems?

there are several tropical storms a year. in some years over 15. all i am saying is disturb the substrate on a regular basis. it could be weekly or it could be every year. it should match the amount of SRP one wants to provide to the must have organisms.

2) The assumption that the benthos gets overcrowded is false. Even if it reached a space-based carrying capacity (which I highly, highly doubt because our abundances are several orders of magnitude lower than on the reef), it would stay at an equilibrium. And we've been over this oP export mechanism over and over...it is remineralized into soluble forms that diffuse out into the water column where it can be either scavenged by other organisms or removed via artificial filtration methods.

It is all eventually broken down into SRP. And then it's removed. Or perhaps the tank has sand bed grazers, which form another removal mechanism. Once at steady state, the net movement is P out of the sediment due to remineraliztion. The fact that you need a benthic population doesn't change this.

waste organic P, whether it is poo or dead organisms, does not just magically become SRP. bacteria decompose it. so, what happens to the bacteria? how does that bacteria become SRP? all the while more waste organic material coming into the system/substrate. in order for any of that 38% organic poo phosphate to become more SRP, there needs to be bacteria.

I agree, which is why I have been explaining over and over how a functioning benthic sand bed actually works, because it seems benthic ecology is a topic not often discussed in the hobby. What I take issue with are things like the insinuation that because you have more biomass this is necessarily a bad thing, or the incorrect assumption that organic matter or phosphorus will always build up ad infinitum in a sand bed despite well-known export mechanisms.

more biomass=less resources for the organisms we want to keep, or in the case of all of the decomposers the production of CO2. the more waste organic material, the more decomposers, the lower the pH. it is not a coincident that good algae growth and the need for it on an off light cycle go hand in hand. what happens if all of that algae growing in the live sump or the ATS were to be removed. what would happen to the pH? the same bacteria that are feeding the ATS/Chaeto/SRP to be removed later are pouring CO2 into the system.

Not true. Although phosphate tends to be the preferred form for uptake, they can utilize both.

it is the uptake of the inorganic P (SRP) that is most important to us.

I think you mean in order for P to buildup. It does not matter what form it is, because it can be rapidly converted between them. There does not need to be an export of organic P for organic P to not buildup; there just needs to be an export of P after it has been converted, and this is precisely what happens (though as a side note: organic P also diffuses out of the sediment after being excreted)

there has to be an export of organic P. the decomposing organism, the poo, the dead organisms. they just do not spontaneously become SRP. all of these organisms and material needs to be taken into account when discussing P.

No, that is not what happens. Bioturbation and irrigation result in a net removal of phosphorus from the substrate. I think I've said this over and over...

if you mean stirring up the substrate and vacuuming out the detritus, then yes it will result in the removal of P from the substrate. if not, then no. the only person i know of that uses irrigation in the substrate is Paul B. and i think that makes great sense. it goes with what has been said all along.

Once again, ORGANIC MATTER IS NOT BEING HIDDEN IN A SUBSTRATE. Period. To say so, especially if being presented as a supposed "con" of the method, is just flat out wrong. It is being decomposed and exported in a variety of different forms. In a mature tank with a healthy sand bed, presumably at steady state, there is no buildup of reactive organic matter in the sediment.

you have got to be kidding us. :( we can see it when we stir up the substrate. what is all of that stuff in the substrate if it is not hidden waste organic material. are you suggesting that all of us are blind? there is nobody reading this that believes that waste organic material is not building up in the substrate. if it wasn't, then none of these magical benthic organism would have anything to eat. this material has to be getting into the substrate somehow.

If by a buildup, you mean the growth of the organisms in the tank, then yes, there is a buildup by definition. But aside from that, there is no "obvious" build up of material in a healthy tank. And if we do count the growth of the system, so what? You have not made a compelling case for the necessity of limiting biomass aside from the point that there is more stuff to die when you have more stuff.

because every organism uses resources and creates waste. whether that is space, the production of CO2, the uptake of O2, or even the use of carbonate. these are all resources that could be put to use by our must have organisms.

This goes back to an old point: we don't know that this detritus is detrimental. We don't know what it is, if it's reactive, etc etc; based on my experience and what I know of the natural ecology of the systems, I honestly think it's non-reactive (possibly refractory, possibly not even organic). I don't remove any and my system is running just fine.

even if it is non-reactive, what good is it doing in the system? it is taking up space. if it is so non-reactive, then why is it so important not to disrupt the substrate if it has not been touched in a while? the longer a substrate has been untouched the greater the risk of a system crash from disturbing the substrate. if it was unreactive, then the longer the substrate has been in place the less of the risk. there would be even less SRP in the substrate than when it was young.

why do you think i haven't? if advective flow or bioturbation did the job that you are saying, then there will not be an increase in waste organic material in a substrates. how would it get in there? what i am suggesting is that bioturbation is actually pushing the waste organic P further down into the substrate. causing a slow migration of P downward into the substrate. allowing more nutrients to be sunk into the substrate.

Because you said so.

nope, because i can see it. it was not there when i put the substrate in the tank. it is there now. where did it come from?
.
i am not seeing any leaving the substrate? this is a pretty easy observation here.

Sunk and slow in a fed reef tank are good things ,IMO.

now it is sunk? i though it was migrating upwards. :confused:

Nutrient movement into and out of the substrate and conversions to organic and inorganic phosphate are two way streets not dead ends. I know you are probably going to say you've been saying that right along and shift position,mistate mine or construct a pliable strawman to debate;so, let's skip all that and look at what you have actually been saying all along:

there is not a mechanism either in nature or in our tanks for migrating N and P upwards through our substrates post 156

Not so;diffusion ,bioturbation, advective flow and planktonic biological activity move some up and out to the water

the in fauna help in the slow migration of N and P deeper into the substrate, they DO NOT migrate N and P upwards through the substrate.
post 173.

see above

there is an entire ecosystem all into itself in a substrate. post 183


back to the point i was making much earlier into this post. waste organic material does not magically become SRP. bacterial decomposition is necessary. there is going to be an increase in waste organic material if more waste organic material is coming in from above. the rate of breakdown is not able to keep up. that darn 38% over time problem.

that entire ecosystem that is feeding on all of that material that is migrating upwards from somewhere deep inside the acrylic or glass pane at the bottom of the tank? where is the food for this ecosystem coming from, if not from above? and if it is coming from above and is migrating upwards by all of the process you speak of, then how did it get in there in the first place?

thought we went through how DSB's work. :( it is the slow migration of nutrients downward through a substrate leaving the upper levels able to bring in more nutrients from the water column. this is how DSB's work, and this is why they "seem" to work so well. Post 228

there is more to it ,see above

what exports P from a substrate? there is not a biological export mechanism for P from a substrate. post 333

see above

then how does it get there in the first place? why would it reach equilibrium? because you say so? i say it reaches an equilibrium when the slow migration of P is stopped because of a lack of resources from the accumulation of waste organic material. leaving all of the waste organic material above to decompose on top of the substrate. just a theory. :D

vacuuming of the substrate is the only way to remove P

Agh, While I personally, think siphoning some detritus is useful as a means of export . It is not the only way.

never said it was the only way. in fact i posted a graphic much earlier in this thread showing what types of P the various methods of P removal we use remove.

but none of this would occur if P migrated upwards instead of downwards. :) Post 353

It's a two way street ;not a dead end.

the problem is that there is more going into than out of the substrate. it is a sink. it is not balanced. there have been several graphics showing that it is not a one way street. it doesn't matter if it is just a tiny bit or a whole lot being sunk, the point is that P is being sunk. more is coming in, than going out. something that is easy to observe.

mineralized phosphates is where the problem is. we are ignoring the phosphate solubilizing bacteria again. :( post 358

If you really think so, why all the blather about one way sinking of organics?If there is psb activity in a reef tank at all ,it would be insignificant IMO.There is nothing offered r to support your position on this point.

because these PSB's are more organically bound P that has to be accounted for. another increase in biomass. IMO these PSB's are why DSB work for their limited time.

i would say most of the P in a newly setup tank comes from the calcium carbonate structures. 355

I say most of it comes from food, waste from organisms and decaying organic matter .


i said from newly setup systems. setup a tank. put some dry base rock in it. let it go with some light and some flow. in a few weeks, there will be algae. where did the P come from to support the algae? do you remember the Southdown days? if the bags were stored outside in the sun and got wet, they would have algae growing in them.

some data on mined sources of LR.

skimming are all going after the inorganic P in the water column. post 411

No, mostly amphipathic organic matter.


the question is how the bacteria and algae that are removed from skimming get their P. they uptake inorganic P from the water column. they are not accessing the inorganic, or organic P from the substrate, only the water column. post
416

No,see above ;they take up organic compounds some of which can be produced in the substrate.

i thought the point of carbon dosing was to lower the SRP levels?

I do have, hopefully, a relevant question to ask, particularly to the DSB proponents as I have not been in this hobby long enough to know. PaulB mentioned Schimek and everyone who's done any research knows he's a big name in this hobby. What happened to him? Why hasn't he been more vocal in the hobby in recent times? Of course I am disregarding his website and the fact that he charges, what, $1 to answer questions. Where is Borneman? Did he ever get his PhD? There are a few other fathers of DSB, for lack of a better phrase, that have fallen off the face of the hobby as well. Why aren't they here to defend in threads like this? Or is the technique now to stay above the fray and let the proxies battle it out?

The reason I think this is a relevant question is because if the original theories of DSB still holds true, why aren't they here to respond?

I will also say that although there is science behind the arguments, no one tank is the same and any specific research can be debunked by just 1 tank, whether it's PaulB's tank or a tank that has a had a DSB running for 10 years. It is a hobby after all, we are here to find out the best way to take care of our tanks, not yours.

lets just say 2007-2008 were interesting years for the reef hobby industry. this is a very touchy subject here on RC. in other places the reasons why Shimek and Borneman are missing can be more openly discussed.

the science is the same for all systems. it shouldn't matter if the system is BB, DSB, SSB, RUGF, it should all be easily explained using the same science. if not, then why not? all anybody can do is give someone all of the information that has gotten them to their decision. give someone the key words necessary to do their own research, at their own pace to see what makes the most sense to them. nobody should be offended for asking dumb questions or for asking for more clarification. we can all agree that if you have a question, that somebody else probably has the same question.

G~
 
Are Deep Sand Beds, DSBs, dangerous to use in a marine aquarium?

I get a lot of these worms (but little else apart from asterinas burrows, and snail incursions). There's no crud build up as far as I can tell and it's ten years old, (the dark patches are algae on the glass). Perhaps sediment particle size is crucial (mines play sand). Don't see anything dangerous;

196ebb149d7c9232ea4f0709959f1696_zps1d50662f.jpg
 
PaulB mentioned Schimek and everyone who's done any research knows he's a big name in this hobby. What happened to him? Why hasn't he been more vocal in the hobby in recent times?

He now charges people per question posted to him. 5$ per question. Not a good way to stay especially involved, IMO, but you do what you gotta do.
 
PaulB mentioned Schimek and everyone who's done any research knows he's a big name in this hobby. What happened to him? Why hasn't he been more vocal in the hobby in recent times?

He now charges people per question posted to him. 5$ per question. Not a good way to stay especially involved, IMO, but you do what you gotta do.

Do ya get a refund if his reply is proved wrong? There's a scientific principle somewhere which states 50% of scientific facts are defunct within 2 years.
 
Here's my analysis in a simplistic few sentences.... That there IS actually some agreement between the 2 main parties. Through all of the scientific lingo and the back and forth of see this post and see that post, I come to one conclusion, for now. (Forgive me if I am a bit off base as I caught this thread more recently and hadn't had a chance to go back too far.)

Reefin' Dude is doing an excellent job explaining that all tanks need to have manual intervention (siphoning of the sandbed as the main example). The main point is that if we let the poop, trash, whatever, remain in our tanks, our tanks will eventually overflow. Again, no science lingo, everyone can understand. This, of course, goes against the fathers of DSB. In more recent posts from the people arguing on the other side of Reefin' Dude (presumably for DSBs but now we have learned not necessarily so, which is important), I see hints if not obvious statements in agreement to Reefin' Dude's comment. I have heard Billsreef say he disturbs his DSB (I assume that means clean) and I have heard TMZ say similarly. Does this mean the lines are slowly converging?

If so, what's the argument truly about? Is it about the different reasons we should manually clean our tanks?

Is the answer to this thread, "No, DSBs are not dangerous if you maintain it properly and not let it sit untouched"? If so, I think all parties are in agreement.

No $5 needed. :)
 
... The main point is that if we let the poop, trash, whatever, remain in our tanks, our tanks will eventually overflow. ...
And there is still disagreement here.

Bill did minimal siphoning. Amphiprion does no stirring or 'taking out of the trash' and has had success. Others have posted here with long term success with no siphoning stirring etc.

This is not scientific lingo-ism, its testimonial. Why is it so hard to accept that people can succeed using a sand bed as originally outlined?

I don't think anyone is saying sand beds are the be all and end all. Just that they work.
 
And there is still disagreement here.

Bill did minimal siphoning. Amphiprion does no stirring or 'taking out of the trash' and has had success. Others have posted here with long term success with no siphoning stirring etc.

This is not scientific lingo-ism, its testimonial. Why is it so hard to accept that people can succeed using a sand bed as originally outlined?

I don't think anyone is saying sand beds are the be all and end all. Just that they work.
.....
They work and require husbandry. Maybe they pose no additional benefit over a shallow bed.
 
why would it reach equilibrium? because you say so?

No, I never said it would or wouldn't reach equilibrium; talking to a strawman again?It may or may not depending on variables in a given tank My point is much simpler and less absolutist ; your statement that there is no biological means for export is wrong. there are several which I noted.
 
we were not talking about the water borne algae and bacteria, we were talking about the algae/cyano growing on the substrate.

Do you think they and their exudates are somehow barred from the water by some invisible force or barrier. Just because they grow on a surface doesn't mean they don't interact with the water for uptake and excretion of nutrients.
 
That is entirely possible. Nobody has done any experiments since the early days to test any of the various hypotheses.

What do you mean by early days? I started my first 20g freshwater with an undergravel filter in 1971! This was a well constructed experiement done in 2005 (http://www.advancedaquarist.com/2005/6/aafeature)

There are probably more out there that we have not taken the time to think through and apply to our systems.
 
Originally Posted by tmz
algae is not able to uptake organic P, organic P must first be converted to SRP by bacteria.
Explain what you mean by SRP.
Algae can access organic phosphate.
It can also convert inorganic phosphate to it.


SRP soluble reactive phosphorous. inorganic p. what good is algae to us then if it is able to uptake organic P? nobody is denying that algae is able to convert SRP to organic. once it is converted to organic again, then what happens to the P? if it keeps going around and more food is going into the system, then there must be an increase in total P.

The aglae needs to be harvested along with it's exudates via various methods for a reduction in phosphate to occur.

Look up phosphotase.,enzymes. Your statement that bacteria must convert organic phosphate to inorganic phosphate for algae to use it is wrong. Algae can produce enzymes for this purpose.
 
now it is sunk? i though it was migrating upwards. :confused:

In context please, I actually said:

Sunk and slow in a fed reef tank are good things ,IMO.

If both both slow migration up and down and some sinking occur. This makes it easier to get a balance between imports and exports via a variety of methods.
 
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