I obviously didn't use any of the boards with the battery error.
The only difference between the two versions of the board is the layout of some of the parts. Functionally every connection is the same.
R10 is a resistor marked with 222 that goes right inbetween R11 and the ds1307 clock crystal. Sorry for not having better tutorials yet.
I hit a little snag that took a while to fix yesterday with the code so I had to push it back. There is very little left to do on the arduino mega side so I WILL post the code tonight by the time everyone gets off of work. Then I just have to checkup on the atmega328 code I wrote a while ago and touch it up a bit and that will be ready to go as well.
Tom, I can't remember his handle on here, has been working very hard to get a website up and running where we can post all the tutorials and downloads along with information on the boards so no one has to rummage through 33 pages of the forum to figure out whats going on. He is also going to help out with pushing data to the site from the controller once the best wifi solution is decided on.
Then its off to get the arduino due/5" screen running!