I suffered from 2 types of Bryopsis from the very start of setting my 34 gallon tank up as it came in on the live rock I bought. I spend loads buying more and more Tech M, and that didn't do a thing. As I hadn't stocked my tank yet, I tried a whole tank dose, by adding a gallon of 35% Hydrogen Peroxide. The Bryopsis suffered a bit, but it didn't wipe it out. So I tried a stronger dose then, and added TWO GALLONS of 35% Hydrogen Peroxide, effectively bringing my entire tank's water to a Hydrogen Peroxide strength of over 2%. That wiped it out, and wiped everything else out including coralline, a snail, bacteria. I cleaned and disinfected all my tools and equipment as well, and figured I was finally rid of it.
I also was adamant about trying to prevent any algae from going into my tank, by dipping any frags in 2% H2O2 for a few minutes, cutting the frags off the rocks they came in on, etc. That didn't work, and before long I still had Bubble Algae/Valonia and Hair Algae of both Derbasia and Cladophora types. That Hair Algae practically seemed carnivorous, and it practically ate a few frags of corals such as Zoas and GSP. And then I thought I saw a tuft of Bryopsis growing from a rock, and freaked out. I can't imagine where that could have come back from even, perhaps a piece of rubble which had been dry for several months but still had spores on it or roots in it? That's the only place I could think of.
So I went on a rampage against it, threw out several frags where I spotted it, dipped a few other frags in H202, and cut off and threw away sections of live rock which had any growing on it. That seemed to work, until I spotted some more growing from inside a rock where I couldn't reach it.
I took that rock out, dipped it in full strength 35% H202 for a few minutes, let the rock soak in the water I removed from the DT with a water change for a few minutes, and then stuck it back in the tank. I did see it bubbling, and saw some of my corals such as my Xenia close up, but I'd seen them do that before when I dipped them as frags so wasn't too worried. I was late already for an event, so I had to run then. And when I looked at my tank the next morning - tank crash...
Half my corals, my shrimp, my snails, my mini-brittle stars, dead, dead dead. Everything was closed up, sliming, looked hellish. I'd just finished collecting all the corals I wanted, so this was gut wrenching. I lost all my birdsnest, most of my mushrooms, my montis, etc, etc. I broke off and threw out what was definitely gone, and nearly threw out some of my others which looked really bad such as my Palythoas. It was on a holiday and I didn't happen to have any saltwater prepared nor could I buy any as my LFS was closed. I tested and found ammonia present, and added ammo-lock, and live bacteria cultures as soon as I was able to. And I mixed several buckets of new water and eventually did a 90% water change. Frustrating that this crash was caused 100% by my own doing, when I was trying to be adamant about getting rid of algae. And ironically then, as a result of that, I had an algal explosion, including more Bryopsis. I have to conclude that a whole tank treatment of H202 can't be administered at a high enough dose to kill Bryopsis but not the rest of the tank.
I tried to find a Sea Hare or Lettuce Slugs but couldn't, and a friend recommended Turbo Snails. I knew Turbo Snails weren't going to work, but I got one anyway. And to my astonishment, within 3 days it had eaten all my Bryopsis, and it never came back!... I know that flies in the face of what everyone else says, but my one Turbo Snail quickly mowed through and eliminated Bryopsis from my tank.
Half of my corals eventually recovered, some only in sections, and my Hammer Coral seemed to have been fine throughout and grown considerably through that episode if anything. I did suffer from Red Slime Algae for a while, but within a few months my tank seemed to have fully stabilized and was looking back to normal and good again, if a little more lightly stocked.
Conclusion: Be very careful when dipping rock in H202. I didn't consider my rock to be porous really, but I still should have let it soak in saltwater for at least 24 hours before putting it back in, instead of a few minutes no matter how much of a hurry I was to be someplace. I'm not sure even if it was H202 released into the water that caused everything to crash, things in the rock that were killed by the H202 that released ammonia or toxins into the water (unlikely), or my Palys being irritated by H202 and releasing their poison into the water?