Thanks for the dialogue everyone. Quick update for those interested.
I felt I had enough live rock in my DT and sump to keep up with the bio load, so I disconnected the refugium from the DT completely. I removed all macro algae, water, and the first inch of sand into a bucket. I discarded the rest (the anaerobic layers did smell), and rinsed out the tank. Added back the macro, water, and little sand I saved (mainly for microfauna), and topped it off with tank water from the display tank. I've left it disconnected this entire week with a power head for circulation. No real ammonia readings, but I don't trust my 5 yr old API kits. I'm leaving it disconnected until tomorrow or the next day when I get my newer test kits in the mail. Then I'll reconnect it to the display when the water chemistry looks good.
I'll let you decide if this is relevant, but during this time my male clown showed signs of flukes. Another variable during this time was a slight kalk overdose. Whatever it was, it appears he fought it off naturally over the course of 3 days.
I felt I had enough live rock in my DT and sump to keep up with the bio load, so I disconnected the refugium from the DT completely. I removed all macro algae, water, and the first inch of sand into a bucket. I discarded the rest (the anaerobic layers did smell), and rinsed out the tank. Added back the macro, water, and little sand I saved (mainly for microfauna), and topped it off with tank water from the display tank. I've left it disconnected this entire week with a power head for circulation. No real ammonia readings, but I don't trust my 5 yr old API kits. I'm leaving it disconnected until tomorrow or the next day when I get my newer test kits in the mail. Then I'll reconnect it to the display when the water chemistry looks good.
I'll let you decide if this is relevant, but during this time my male clown showed signs of flukes. Another variable during this time was a slight kalk overdose. Whatever it was, it appears he fought it off naturally over the course of 3 days.