I just wanted to say that this is one of the coolest projects I've seen on here, and since it hits a lot of the design goals I have for my dream monster, I'm paying close attention. Perhaps most encouraging is the fact that "near Venice Beach" isn't that much further south than Columbus OH, where I live, and I wanted to use a skylight as a primary light source too, supplemented by "green-powered" traditional light sources as needed. You look to be getting good light!
I also was thinking about setting up a geothermal chiller (and/or heat pump, depending on what I actually need), since I hope to use geothermal to condition my home when we actually get it built.
Your koi pond is interesting too - do you have a link to information about that build as well? We have a large man-made pond on our farm, but I think I'd like a nicer koi pond in a more structured garden at some point.