With your oyster reefs, it may look weird to crowd them with plants, so it may work better to put them in a sump/fuge. Acrylic tanks are so easy to cut and drill, etc. I've done a ton of mods to mine. Regular, wood, hole saw bits are cheap and work fine, as do regular jig saws. Depending on how you place the tank, you could do a coast2coast, or a corner overflow. Plus, you can put them on the outside of your tank, so they don't take up any space. You can even skip the overflow and just use screened bulkheads, but you won't get the great surface skimming of a long overflow, and they could clog.
Do you have any plans to soak/cure your reefs? It seems likely those oyster shells would leach some stuff that might cause an algae bloom. A trash can or baby pool might be handy for that, or you could put them in the tank with no light, and change the water frequently until it's done.
I know it's a bit daunting to start hacking away at your brand new tank, but it may be about that time! Good luck!
I still have 3 gorgonians. None are thriving, in my opinion. I'm sure I could do more to favor them, but I want them to work without any special treatment, like target feeding. I know I'm way too lazy for that. They have to survive with my regular broadcast tank feeding.