yup, i call them '2-tone' in my tank. i could take a small colony that looked well colored in my tank, and turn it 10 degrees and the whole thing turns brown. i've recently been through a move and some big changes so *everything* is brown all over in my tank at the moment.
i think it's root cause is water quality. light might seem to be the cause, because intense light forces color sometimes when water quality is good but not quite perfect, right where it hits straight on, by overworking the zoox so the coral has no choice but to reduce zoox denisty in that specific region. and alot of people like to say their water is 'perfect', but let's be honest. once you've seen a tank that's truely 'in the zone', you realize that even most TOTMs have good water, not always *perfect*.
i've had *brief* moments where i think my water was close to perfect i think (not trying to brag or imply my tank is anywhere close to totm quality). with no change in lighting the water quality magically improved (and probably accidentally since i am completely unable to maintain or reproduce it at will, which is why i can't brag). well, when the stars were aligned and everything came together the 2-tone went away, good color all round, in every nook and cranny no matter how i spun the coral around, even completely upside down. water quality was happy enough that the corals didn't need dense populations of zoox to provide enough sustenance, so it was able to broadcast the message to reduce zoox populations over the entire colony. i have a pic of this one coral in particular that went the same color as a glow-in-the-dark toy over every part of the colony, regardless of being shaded or not. that opalescent glowing minty green. never posted it because it looks like it's been beaten silly with photoshop. i'll see if i can dig it up (don't have my pics with me at work). what's odd is these bried windows of time seemed to usually happen right on the tail end of an algae outbreak (so the pics i do have of popping corals has them surrounding by nasty paradoxical algae). i think bad water quality made algae grow all over the rocks, then i was able to get the water quality fixed, and for a few days that remaining algae was able to suck down even more nutrients than normal to get things 'in the zone', then the algae faded away and the nutrients went back up to normal. so sort of an in-tank fuge even though i had an attached fuge with caulerpa and chaeto already. maybe one day i'll have it figured out...